The 2isa suite is a collection of programs that can extract metadata out of various metabolomics file formats and write them to ISA-Tab files, creating the backbone for an ISA-Tab study that can then be shared on databases such as MetaboLights. Right now the following source files are supported:
Command Line Applications / Libraries¶
The command line applications / libraries are currently divided into the mzml2isa package (covering mzML and imzML) and nmrml2isa (covering nmrML).
Graphical User Interfaces¶
The graphical user interfaces are divided into mzmlisa-qt (covering mzML), imzml2isa-qt (covering imzML) and nmrml2isa-qt (covering nmrML).
The Galaxy interfaces are divided into mzml2isa-galaxy (covering mzML and imzML) and nmrml2isa-galaxy (covering nmrML)