mzml2isa

mzml2isa is a program that allows you to convert metabolomic studies in .mzML (and .imzML) format to the open ISA-Tab standard supported by the MetaboLights database.

• Installation
  • Windows
  • Dependencies
  • PyPI (stable version)
  • GitHub (development version)
• Usage
  • Folder structure
  • CLI
  • Python module
  • Editing with ISAcreator
• Examples
  • CLI
  • Python module
• Frequently Asked Questions
  • What metadata does mzml2isa extract from .mzML files ?
  • What metadata does mzml2isa extract from .imzML files ?
  • How do I report an issue / ask for a new feature ?
  • The program crashed when I used it on my files, what should I do ?
• Extracted Terms List
• API reference
  • mzMLmeta (metadata extraction)
  • ISA_Tab (isatab writing)